A Regionalized Automated Measurement of Ciliary Beating Frequency

Puybareau, Elodie ;   Talbot, Hugues ;   Pelle, Gabriel ;   Louis, Bruno ;   Papon, Jean-François ;   Coste, André ;   Najman, Laurent

Tags Motion compensation and analysisCells & moleculesMicroscopy - Light

Cilia are slender, microscopic, hair-like structures or organelles that extend from the surface of nearly all mammalian cells. Motile cilia, such...

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An Open-Source Vaa3D Plugin for Real-Time 3D Visualization of Terabyte-Sized Volumetric Images

Bria, Alessandro ;   Iannello, Giulio ;   Peng, Hanchuan

Tags VisualizationAnimal models and imagingMicroscopy - Fluorescence

Modern high-throughput bioimaging techniques pose the unprecedented challenge of exploring and analyzing the produced Terabyte-scale...

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Gradient Weighted Co-Hog for Analysis of Caudal Vein Structural Changes in Toxin Exposed Zebrafish Embryo

Hans, Charu ;   McCollum, Catherine ;   Bondesson, Maria ;   Shah, Shishir ;   Merchant, Fatima

Tags Shape analysisQuantification and estimationClassification

In this paper, we propose an approach to detect abnormalities in the vascular development of zebrafish embryos due to exposure to toxins....

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Quantitative Comparison of Micro-Vasculatures

Linder, Manon ;   Duplaa, Cecile ;   Couffinhal, Thierry ;   Malandain, Gregoire

Tags VesselsShape analysisModeling - Anatomical, physiological and pathological

Angiogenesis is a key component of ontogenesis, but also of tumor development or in some pathology repair (i.e. ischemia). Deciphering the...

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Tracking Virus Particles in Fluorescence Microscopy Images via a Particle Kalman Filter

Godinez, William ;   Rohr, Karl

Tags Tracking (time series analysis)Cells & moleculesMicroscopy - Fluorescence

Tracking fluorescent particles in microscopy image sequences is pivotal in obtaining quantitative characterizations of the dynamical processes...

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