A Bayesian Network-Based Approach for Discovering Oral Cancer Candidate Biomarkers

Kourou, Konstantina ;   Exarchos, Konstantinos ;   Papaloukas, Costas ;   Fotiadis, Dimitrios I.

Tags Network modelingParameter estimationBiomedical data-driven modeling

Oral cancer can arise in the head and neck region. Due to the aggressive nature of the disease, which often leads to poor prognosis, Oral...

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Dynamic Partial Reconfiguration Implementation of the SVM/KNN Multi-Classifier on FPGA for Bioinformatics Application

Hussain, Hanaa ;   Benkrid, Khaled ;   Seker, Huseyin

Tags Analysis of high-throughput systems biology dataMining clinical dataComparative effectiveness research

Bioinformatics data tend to be highly dimensional in nature thus impose significant computational demands. To resolve limitations of conventional...

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Extension to Distributed Annotation System: Summary and Summaryplot Commands

Chrysostomou, Charalambos ;   Brookes, Anthony

Tags Biomedical data-driven modelingStructured data visualization

In recent years, the development of high-throughput sequencing technologies provided an effective way to generate data from entire genomes...

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Metabolomic Pathway Visualization Tool Outsourcing Editing Function

Sugimoto, Masahiro

Tags Structured data visualization

Recent rapid improvements of measuring instrument enables us to perform various omics studies to simultaneous profile multiple molecules, which...

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OmicsConnect Toolbox: A Set of Tools for Management and Visualisation of Complex Omics Data

Chrysostomou, Charalambos ;   Brookes, Anthony

Tags Structured data visualizationBiomedical data-driven modeling

In this paper, a set of user-friendly software tools, along with two online tools, DAS server and Genome Browser server are presented. These...

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The Quantitative Prediction of HLA-B2705 Peptide Binding Affinities using Support Vector Regression to Gain Insights into Its Role for the Spondyloarthropathies

Uslan, Volkan ;   Seker, Huseyin

Tags Comparative effectiveness researchBiomedical data-driven modelingAlgorithms and computational tools for proteomics

Computational methods are increasingly utilised in many immunoinformatics problems such as the prediction of binding affinity of peptides. The...

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