Biomolecular Implementation of a Quasi Sliding Mode Feedback Controller based on DNA Strand Displacement Reactions

Sawlekar, Rucha ;   Montefusco, Francesco ;   Kulkarni, Vishwesh ;   Bates, Declan Gerard

Tags Synthetic biology circuits

A fundamental aim of synthetic biology is to achieve the capability to design and implement robust embedded biomolecular feedback control...

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Development and Experimental Validation of a Mechanistic Model of in Vitro DNA Recombination

Bowyer, Jack Edward ;   Bates, Declan Gerard

Tags Synthetic biology circuitsModeling of biomolecular system dynamicsParameter estimation

Engineering cellular memory is a key area of research in which Synthetic Biology has already begun to make significant impacts. Recent work...

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Methods for Genetic Optimization of Biocatalysts for Biofuel Production from Dairy Waste through Synthetic Biology

Pasotti, Lorenzo ;   Zucca, Susanna ;   Casanova, Michela ;   Politi, Nicolo' ;   Massaiu, Ilaria ;   Mazzini, Giuliano ;   Micoli, Giuseppina ;   Calvio, Cinzia ;   Cusella De Angelis, Maria Gabriella ;   Magni, Paolo

Tags Synthetic biology circuitsAlgorithms and techniques for systems modelingNetwork modeling

Whey is an abundant by-product of cheese production process and it is considered a special waste due to its high nutritional load and...

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Reconfigurable Neuromorphic Computation in Biochemical Systems

Chiang, Hui-Ju Katherine ;   Jiang, Jie-Hong R. ;   Fages, Fran├žois

Tags Synthetic biology circuitsMedical decision making

Implementing application-specific computation and control tasks within a biochemical system has been an important pursuit in synthetic biology....

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Retroactivity Analysis of a Chemical Reaction Network Module for the Subtraction of Molecular Fluxes

Bilotta, Mariaconcetta ;   Cosentino, Carlo ;   Bates, Declan Gerard ;   Salerno, Luca ;   Amato, Francesco

Tags Synthetic biology circuitsModeling of biomolecular system dynamics

The availability of a well-characterised subtraction module is a key step towards the realisation of modular embedded feedback controllers in...

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